The Bonus Game is a Minigame in Yoshi's Woolly World. It can be accessed by getting a Smiley Flower in the Goal roulette. In the minigame, Yoshi must collect fruit within the time limit of 12 to 20 seconds, which consist of apple, kiwi, lemon and orange slices. Each fruit slice is worth 50 points. If all of the fruit has been collected, the stage will regenerate more fruit, and Yoshi will earn extra time. Partway through a game, a watermelon slice will appear, which is worth 300 points. When time runs out, the total score Yoshi has accumulated will be converted into Beads. There are many variations of this bonus game:

• Fruit will appear out of reach above Yoshi, which must be collected by throw the Yarn Balls produced by Egg-Plants at them.
• The ground moves in a wavy motion.
• The stage is filled with Bouncies.
• The stage contains teetering platforms in a volcano setting.
• The ground and platforms are made of ice.
• The stage contains curtains which move back and forth, revealing invisible platforms on which the fruit floats.